ODE3DVariant.hpp

// Unfit: Data fitting and optimization software
//
// Copyright (C) 2012- Dr Martin Buist & Dr Alberto Corrias
// Contacts: martin.buist _at_ nus.edu.sg; alberto _at_ nus.edu.sg
//
// See the 'Contributors' file for a list of those who have contributed
// to this work.
//
// This program is free software: you can redistribute it and/or modify
// it under the terms of the GNU General Public License as published by
// the Free Software Foundation, either version 3 of the License, or
// (at your option) any later version.
//
// This program is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
// GNU General Public License for more details.
//
// You should have received a copy of the GNU General Public License
// along with this program.  If not, see <http://www.gnu.org/licenses/>.
//
#ifndef UNFIT_EXAMPLES_ODE3DVARIANT_HPP_
#define UNFIT_EXAMPLES_ODE3DVARIANT_HPP_

#include <vector>
#include "GenericCostFunction.hpp"

namespace Unfit
{
namespace Examples
{
class ODE3DVariant : public GenericCostFunction
{
  public:
  ODE3DVariant(const std::vector<double> &x, double dt)
    : x_ {x},
      dt_ {dt}
  {}

  std::vector<double> operator()(const std::vector<double> &param)
  {
    auto residuals = x_;
    double predicted_x = param[2];  // Initial condition
    for (auto i = 0u; i < residuals.size(); ++i) {
      residuals[i] -= predicted_x;
      predicted_x += dt_ * (param[0] * predicted_x + param[1]);
    }
    return residuals;
  }
 private:
  const std::vector<double> x_;
  const double dt_;
};

}  // namespace Examples
}  // namespace Unfit

#endif